The two sides discussed the bilateral defence relationship and regional security with reference to Afghanistan.
On Monday, insurgents overrun Aybak, capital of the northern province of Samangan.
Qureshi regrets being snubbed at the UNSC session on Afghanistan.
Taliban fighters overran two provincial capitals, including the strategic northeastern city of Kunduz and northern Sar-e Pul, on Sunday.
Pakistan, Turkey, and Iran should therefore work closer together to confront this unconventional threat.